Information for 1-GGGTGGCATGCTG (Motif 1)

A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A G T C C G T A A C G T A C T G A T G C A G T C C T G A A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 30.9bp
Average Position of motif in Background69.0 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGGTGGCATGCTG
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGTGGCATGCTG
GGTTGGCAT----
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGTGGCATGCTG-----
---NNTCCTGCTGTGNNN
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGTGGCATGCTG-----
---TCNCCTGCTGNGNNN
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGGTGGCATGCTG---
------CCTGCTGAGH
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGTGGCATGCTG-----
---TNTCCTGCTGTGNNG
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGGTGGCATGCTG
---TGGAATGT--
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G
A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGTGGCATGCTG
-GCNGCCATCTTG
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGTGGCATGCTG---
-GGCCYCCTGCTGDGH
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGTGGCATGCTG
-CCWGGAATGY--
 A C T G A C T G T C A G A G C T A C T G A T C G A G T C C G T A A C G T A C T G A G T C A C G T A T C G
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T