Information for 4-CGGGCACCCKSCCTGG (Motif 8)

A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
Reverse Opposite:
A G T C A G T C G T C A T A C G T C A G A T G C G T C A T C A G T A C G A T C G C G A T A C T G A T G C A T G C A G T C T A C G
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.707
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.2 +/- 18.0bp
Average Position of motif in Background52.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGGCACCCKSCCTGG
--GTCACGCTCNCTGA
 A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCACCCKSCCTGG
NNNGGGGCGCCCCCNN---
 A C G T A C G T A C G T A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGGGCACCCKSCCTGG
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGGCACCCKSCCTGG
-TGGCAGNCTGCCAG-
 A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGCACCCKSCCTGG
NNNNTTGGGCACNNCN-----
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGGCACCCKSCCTGG
TTGGCANNNTGCCAAG
 A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGGGCACCCKSCCTGG
---GGTCCCGCCC---
 A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCACCCKSCCTGG
NGTGGGCAT---------
 A C G T A C G T A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGGGCACCCKSCCTGG
-SNGCACCTGCHS---
 A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CGGGCACCCKSCCTGG
--GGCGCGCT------
 A G T C T A C G A T C G A T C G G T A C G C T A A T G C A G T C A G T C C A G T A T C G A G T C A G T C C A G T A C T G C T A G
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T