Information for 3-CMCCTGGGAACAGARC (Motif 5)

G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T A T G C A C G T A C T G A G C T A C G T A T G C A G T C T A G C C T G A A C T G A T C G A C G T A C T G
p-value:1e-12
log p-value:-2.825e+01
Information Content per bp:1.701
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif93.1
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.6 +/- 21.5bp
Average Position of motif in Background51.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CMCCTGGGAACAGARC
-----TGGAACAGMA-
 G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CMCCTGGGAACAGARC
---CCAGGAACAG---
 G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CMCCTGGGAACAGARC
TCCCCTGGGGAC-----
 A C G T G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CMCCTGGGAACAGARC
-SCCTAGCAACAG---
 G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CMCCTGGGAACAGARC
WDNCTGGGCA------
 G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CMCCTGGGAACAGARC
--CSTGGGAAAD----
 G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CMCCTGGGAACAGARC
CGCACCTGCT--------
 A C G T A C G T G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CMCCTGGGAACAGARC
NNCACCTGNN--------
 A C G T A C G T G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CMCCTGGGAACAGARC
CCGCATAGCAACGGA--
 A C G T G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CMCCTGGGAACAGARC
AACACCTGCT--------
 A C G T A C G T G T A C T G C A A T G C A G T C A G C T A T C G A C T G A T C G T G C A T C G A A G T C C G T A A T C G G T C A C T G A A G T C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T