Information for 2-RGCTTTCCTCGCCAGC (Motif 5)

C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A T C G A C T G A G T C A C T G C T G A A T C G A C T G C G T A C G T A C G T A A C T G A G T C A G C T
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 33.9bp
Average Position of motif in Background56.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RGCTTTCCTCGCCAGC
---TTTTCGCGCGAA-
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RGCTTTCCTCGCCAGC
--VDTTTCCCGCCA--
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGCTTTCCTCGCCAGC-
---TTTCCTAGAAAGCA
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RGCTTTCCTCGCCAGC
NNNATTCCTCGAAAGN
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RGCTTTCCTCGCCAGC
GGGGATTTCC--------
 A C G T A C G T C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RGCTTTCCTCGCCAGC
-----TTCCCGCCWG-
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:RGCTTTCCTCGCCAGC-
---TTTTCCCGCCAAAA
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:RGCTTTCCTCGCCAGC
---DTTTCCCGCC---
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RGCTTTCCTCGCCAGC---
--TACGCCCCGCCACTCTG
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:RGCTTTCCTCGCCAGC
----TTTCCCGCCMAV
 C T A G A C T G A G T C A C G T A C G T A C G T A G T C A T G C A G C T A G T C A C T G A G T C A T G C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C