Information for 5-CGGGAGCAGACTC (Motif 10)

G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A G T C A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 14.5bp
Average Position of motif in Background34.4 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCAGACTC
-GGGAGGACNG--
 G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCAGACTC
-CGGAGC------
 G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGGAGCAGACTC
-TGGAACAGMA--
 G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGGAGCAGACTC-
ADGGYAGYAGCATCT
 A C G T G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCAGACTC
GGGCGGGACC------
 A C G T A C G T A C G T G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGGGAGCAGACTC-------
---TACGAGACTCCTCTAAC
 G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGGGAGCAGACTC
CCAGGAACAG----
 A C G T G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CGGGAGCAGACTC
-----BCAGACWA
 G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGGGAGCAGACTC
GGGCCGTGTGCAAAAA-
 A C G T A C G T A C G T A C G T G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCAGACTC
GGGCGGGAAGG-----
 A C G T A C G T A C G T G T A C A C T G A C T G A C T G C G T A A C T G A G T C C G T A A C T G T C G A G T A C A C G T A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T