Information for 6-TGAGBGHAGATCC (Motif 11)

A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
Reverse Opposite:
A C T G A C T G G C T A C G A T G T A C C G A T C A T G A T G C T G C A A G T C C G A T A G T C G T C A
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.783
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.9 +/- 30.1bp
Average Position of motif in Background58.1 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAGBGHAGATCC
TNNGGGCAG----
 A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGBGHAGATCC
CTTGAGTGGCT----
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGAGBGHAGATCC
TTGAGTGSTT----
 A C G T A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGAGBGHAGATCC
BTBRAGTGSN-----
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGAGBGHAGATCC
---GGGAATTTCC
 A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGAGBGHAGATCC
----NGAAGC---
 A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGAGBGHAGATCC
TTRAGTGSYK----
 A C G T A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGAGBGHAGATCC
CTYRAGTGSY-----
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGAGBGHAGATCC
GGGCGGGAAGG---
 A C G T A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TGAGBGHAGATCC-
--NGGGGATTTCCC
 A C G T A C T G C G T A A C T G A C G T A T C G G A T C C G T A A C T G C G T A C G A T A G T C G T A C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C