Information for 4-ATGTCCCTGGTGTTCA (Motif 10)

C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
Reverse Opposite:
G C A T C A T G G T C A C T G A T A G C C G T A T G A C A G T C C G T A C T A G A C T G C T A G G C T A T A G C G T C A A G C T
p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.668
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif109.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets51.4 +/- 21.5bp
Average Position of motif in Background46.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGTCCCTGGTGTTCA
CTGTTCCTGG------
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGTCCCTGGTGTTCA
GAGTTCATTGAGTTCA
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATGTCCCTGGTGTTCA
--CCCCCTGCTGTG--
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATGTCCCTGGTGTTCA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCCCTGGTGTTCA
BNTGDCCTTG-------
 A C G T C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATGTCCCTGGTGTTCA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Ar/MA0007.3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATGTCCCTGGTGTTCA-
GGGAACACGGTGTACCC
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:ATGTCCCTGGTGTTCA
----TCCAGATGTT--
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATGTCCCTGGTGTTCA
-----NCCATTGTTC-
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGTCCCTGGTGTTCA-
GGGTACATAATGTTCCC
 C T G A C A G T A C T G C G A T A G T C G T A C A G T C G A C T A C T G A C T G C G A T A T C G A G C T A C G T G A T C C G T A A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C