Information for 5-GGAACAAGTT (Motif 5)

A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T
Reverse Opposite:
G C T A G T C A A T G C C G A T A C G T C T A G C G A T G A C T A T G C G T A C
p-value:1e-19
log p-value:-4.438e+01
Information Content per bp:1.635
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif16.26%
Number of Background Sequences with motif3084.7
Percentage of Background Sequences with motif6.70%
Average Position of motif in Targets45.0 +/- 25.4bp
Average Position of motif in Background51.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAAGTT
NGGATTAN---
 A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAACAAGTT
CCAGGAACAG---
 A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGAACAAGTT--
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGAACAAGTT-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAAGTT
GGGATTAA---
 A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGAACAAGTT--
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGAACAAGTT--
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAAGTT
GGGATTANN--
 A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GGAACAAGTT
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GGAACAAGTT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A G C T A A G T C C G T A G C T A T A C G C A G T C G A T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A