Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-54 | -1.260e+02 | 0.0000 | 47.0 | 16.10% | 230.7 | 0.48% | motif file (matrix) |
svg |
2 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-52 | -1.209e+02 | 0.0000 | 55.0 | 18.84% | 447.0 | 0.93% | motif file (matrix) |
svg |
3 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-50 | -1.161e+02 | 0.0000 | 53.0 | 18.15% | 433.2 | 0.90% | motif file (matrix) |
svg |
4 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-45 | -1.051e+02 | 0.0000 | 50.0 | 17.12% | 447.4 | 0.93% | motif file (matrix) |
svg |
5 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-20 | -4.798e+01 | 0.0000 | 88.0 | 30.14% | 4803.4 | 10.02% | motif file (matrix) |
svg |
6 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.834e+01 | 0.0000 | 105.0 | 35.96% | 10303.2 | 21.49% | motif file (matrix) |
svg |
7 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-7 | -1.731e+01 | 0.0000 | 26.0 | 8.90% | 1190.1 | 2.48% | motif file (matrix) |
svg |
8 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.590e+01 | 0.0000 | 8.0 | 2.74% | 91.3 | 0.19% | motif file (matrix) |
svg |
9 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-6 | -1.406e+01 | 0.0000 | 28.0 | 9.59% | 1601.8 | 3.34% | motif file (matrix) |
svg |
10 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-5 | -1.253e+01 | 0.0001 | 30.0 | 10.27% | 1939.0 | 4.04% | motif file (matrix) |
svg |
11 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.251e+01 | 0.0001 | 35.0 | 11.99% | 2468.3 | 5.15% | motif file (matrix) |
svg |
12 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-4 | -1.095e+01 | 0.0005 | 29.0 | 9.93% | 1998.3 | 4.17% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-4 | -1.064e+01 | 0.0007 | 14.0 | 4.79% | 598.5 | 1.25% | motif file (matrix) |
svg |
14 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -1.051e+01 | 0.0007 | 15.0 | 5.14% | 687.8 | 1.43% | motif file (matrix) |
svg |
15 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-4 | -9.904e+00 | 0.0012 | 28.0 | 9.59% | 2010.5 | 4.19% | motif file (matrix) |
svg |
16 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -8.713e+00 | 0.0037 | 16.0 | 5.48% | 902.4 | 1.88% | motif file (matrix) |
svg |
17 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-3 | -8.224e+00 | 0.0057 | 23.0 | 7.88% | 1665.3 | 3.47% | motif file (matrix) |
svg |
18 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.818e+00 | 0.0081 | 24.0 | 8.22% | 1826.1 | 3.81% | motif file (matrix) |
svg |
19 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -7.792e+00 | 0.0081 | 25.0 | 8.56% | 1942.1 | 4.05% | motif file (matrix) |
svg |
20 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -7.733e+00 | 0.0081 | 24.0 | 8.22% | 1837.4 | 3.83% | motif file (matrix) |
svg |
21 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -7.404e+00 | 0.0106 | 22.0 | 7.53% | 1656.6 | 3.46% | motif file (matrix) |
svg |
22 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-3 | -7.378e+00 | 0.0106 | 25.0 | 8.56% | 1999.3 | 4.17% | motif file (matrix) |
svg |
23 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.282e+00 | 0.0109 | 19.0 | 6.51% | 1343.4 | 2.80% | motif file (matrix) |
svg |
24 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.752e+00 | 0.0482 | 31.0 | 10.62% | 3009.9 | 6.28% | motif file (matrix) |
svg |
25 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -5.683e+00 | 0.0496 | 15.0 | 5.14% | 1098.0 | 2.29% | motif file (matrix) |
svg |
26 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.572e+00 | 0.0532 | 8.0 | 2.74% | 406.8 | 0.85% | motif file (matrix) |
svg |
27 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.382e+00 | 0.0620 | 14.0 | 4.79% | 1025.5 | 2.14% | motif file (matrix) |
svg |
28 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.363e+00 | 0.0620 | 24.0 | 8.22% | 2202.1 | 4.59% | motif file (matrix) |
svg |
29 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.313e+00 | 0.0620 | 18.0 | 6.16% | 1487.7 | 3.10% | motif file (matrix) |
svg |
30 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.002e+00 | 0.0816 | 16.0 | 5.48% | 1300.4 | 2.71% | motif file (matrix) |
svg |
31 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -4.990e+00 | 0.0816 | 19.0 | 6.51% | 1656.6 | 3.46% | motif file (matrix) |
svg |
32 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -4.869e+00 | 0.0874 | 24.0 | 8.22% | 2296.2 | 4.79% | motif file (matrix) |
svg |
33 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -4.859e+00 | 0.0874 | 13.0 | 4.45% | 979.5 | 2.04% | motif file (matrix) |
svg |
34 |
| IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer | 1e-2 | -4.662e+00 | 0.1011 | 5.0 | 1.71% | 208.8 | 0.44% | motif file (matrix) |
svg |
35 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.636e+00 | 0.1011 | 19.0 | 6.51% | 1716.8 | 3.58% | motif file (matrix) |
svg |