Information for 3-TGTYKWAAAATRC (Motif 8)

A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C G T A C G T A C G T A C G T C G T A G T A C C T A G C G T A A G T C C G T A
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.880
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 23.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0076.1_Hoxd11/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGTYKWAAAATRC-
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXD11/MA0908.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGTYKWAAAATRC
-GTCGTAAAAA--
 A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTYKWAAAATRC
GGTCGTAAAAA--
 A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGTYKWAAAATRC-
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC10/MA0905.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGTYKWAAAATRC
-GTCGTAAAAT--
 A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGTYKWAAAATRC
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTYKWAAAATRC
GGTCGTAAAAT--
 A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTYKWAAAATRC
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTYKWAAAATRC
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTYKWAAAATRC
GGTCGTAAAATT-
 A C G T A C T G A C G T A G T C C A T G C G A T C G T A C G T A C G T A C G T A A C G T C T G A A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T