Information for 3-AACCAAAAAA (Motif 13)

C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
Reverse Opposite:
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif119.8
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets55.1 +/- 22.8bp
Average Position of motif in Background57.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AACCAAAAAA
AAACCACANN-
 A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AACCAAAAAA
AAACCGCAAA-
 A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AACCAAAAAA
AAACCACAGAN
 A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AACCAAAAAA
NWAACCACADNN
 A C G T A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AACCAAAAAA
NAAACCACAG--
 A C G T A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AACCAAAAAA
AAACCACAGC-
 A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AACCAAAAAA--
AACAAACAACAAGAG
 A C G T A C G T A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AACCAAAAAA
AAACCGCAA--
 A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACCAAAAAA---
CAAACAACAACACCT
 A C G T A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACCAAAAAA-----
AACACCAAAACAAAGGA
 A C G T A C G T C G T A G T C A G T A C G T A C C G T A G T C A G T C A C G T A C T G A G T C A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A