Information for 4-CTCTGCHCCCTGG (Motif 4)

A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
Reverse Opposite:
G T A C A G T C G T C A C T A G C T A G C T A G C A T G T A C G G T A C C G T A T A C G C G T A A C T G
p-value:1e-17
log p-value:-3.947e+01
Information Content per bp:1.766
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif36.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.5 +/- 15.5bp
Average Position of motif in Background45.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCHCCCTGG
TGGACTTTGNNCTNTG-
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCHCCCTGG
TGGACTTTGNNCTCN--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCHCCCTGG
TGACCTCTGACCCCN--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCTGCHCCCTGG
--CTGACCTTTG-
 A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGCHCCCTGG
GCTCCGCCCMCY--
 A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCHCCCTGG
TGACCTTTGCCCTA---
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCTGCHCCCTGG
TGACCTTTGCCCCA---
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCTGCHCCCTGG--
---CGCCCCCTGACA
 A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGCHCCCTGG--
NNNNTTGACCCCTNNNN
 A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCHCCCTGG
TGACCTTTGACCTC---
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A C T G A T G C G T A C A G T C A G T C A G T C A C G T C T A G A C T G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T