Information for 8-GCAGGGTACT (Motif 10)

A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T C G T A A G T C A T G C A G T C A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.365e+01
Information Content per bp:1.940
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.5 +/- 23.6bp
Average Position of motif in Background59.8 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTACT------
TTCNAAGTACTTNNNNN
 A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTACT----
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCAGGGTACT-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAGGGTACT
CACAGCAGGGGG--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGGTACT
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTACT
CACAGN-----
 A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGGGTACT-------
TTNGGGTACGCCNNANN
 A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCAGGGTACT
WDNCTGGGCA--
 A C G T A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGTACT------
TACTAAGTACTTAAATG
 A C G T A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCAGGGTACT
NGTGGGCAT-
 A C T G A G T C C G T A A C T G A T C G A C T G A C G T C G T A A G T C C G A T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T