Information for 1-NARGRACABNNTGTNC (Motif 1)

G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C
Reverse Opposite:
C T A G C G T A G C T A A T G C G C T A A C T G G C T A T A G C C G A T A T C G G C A T A G C T G A T C G A T C A G C T C A T G
p-value:1e-184
log p-value:-4.241e+02
Information Content per bp:1.506
Number of Target Sequences with motif326.0
Percentage of Target Sequences with motif42.12%
Number of Background Sequences with motif2747.4
Percentage of Background Sequences with motif5.95%
Average Position of motif in Targets50.5 +/- 22.6bp
Average Position of motif in Background50.0 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NARGRACABNNTGTNC-
-NAGAACAGNCTGTNCT
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC
-VAGRACAKNCTGTBC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC
-VAGRACAKWCTGTYC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC
-AAGAACATWHTGTTC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC-
-NAGNACANNNTGTNCT
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.89
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC--
-GGGTACATAATGTTCCC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C A C G T A C G T
A C G T C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.88
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC--
-GGGAACACAATGTTCCC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C A C G T A C G T
A C G T C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.87
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC--
-GGGAACACGGTGTACCC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C A C G T A C G T
A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-NARGRACABNNTGTNC
CCAGGAACAG-------
 A C G T G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:NARGRACABNNTGTNC
-NAGGTCACNNTGACC
 G T A C T C G A C T A G C T A G T C G A C G T A A T G C C G T A A T C G C G A T T G A C C G A T T A C G C G A T G C A T G A T C
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C