Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-158 | -3.659e+02 | 0.0000 | 412.0 | 53.79% | 5950.9 | 12.95% | motif file (matrix) |
svg |
2 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-94 | -2.174e+02 | 0.0000 | 126.0 | 16.45% | 592.8 | 1.29% | motif file (matrix) |
svg |
3 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-90 | -2.080e+02 | 0.0000 | 121.0 | 15.80% | 571.0 | 1.24% | motif file (matrix) |
svg |
4 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-75 | -1.738e+02 | 0.0000 | 109.0 | 14.23% | 585.8 | 1.28% | motif file (matrix) |
svg |
5 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-64 | -1.494e+02 | 0.0000 | 404.0 | 52.74% | 11025.3 | 24.00% | motif file (matrix) |
svg |
6 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-62 | -1.443e+02 | 0.0000 | 78.0 | 10.18% | 315.0 | 0.69% | motif file (matrix) |
svg |
7 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-9 | -2.137e+01 | 0.0000 | 236.0 | 30.81% | 9790.8 | 21.31% | motif file (matrix) |
svg |
8 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-8 | -1.894e+01 | 0.0000 | 67.0 | 8.75% | 1860.6 | 4.05% | motif file (matrix) |
svg |
9 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.271e+01 | 0.0001 | 21.0 | 2.74% | 381.4 | 0.83% | motif file (matrix) |
svg |
10 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.268e+01 | 0.0001 | 72.0 | 9.40% | 2444.1 | 5.32% | motif file (matrix) |
svg |
11 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-4 | -9.477e+00 | 0.0025 | 50.0 | 6.53% | 1676.7 | 3.65% | motif file (matrix) |
svg |
12 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -8.901e+00 | 0.0041 | 63.0 | 8.22% | 2322.2 | 5.05% | motif file (matrix) |
svg |
13 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.882e+00 | 0.0041 | 59.0 | 7.70% | 2135.6 | 4.65% | motif file (matrix) |
svg |
14 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -8.633e+00 | 0.0046 | 77.0 | 10.05% | 3023.9 | 6.58% | motif file (matrix) |
svg |
15 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.963e+00 | 0.0085 | 90.0 | 11.75% | 3745.5 | 8.15% | motif file (matrix) |
svg |
16 |
| ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.667e+00 | 0.0106 | 25.0 | 3.26% | 706.5 | 1.54% | motif file (matrix) |
svg |
17 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.453e+00 | 0.0124 | 102.0 | 13.32% | 4424.8 | 9.63% | motif file (matrix) |
svg |
18 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-3 | -7.181e+00 | 0.0154 | 53.0 | 6.92% | 1998.2 | 4.35% | motif file (matrix) |
svg |
19 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -7.014e+00 | 0.0172 | 91.0 | 11.88% | 3913.6 | 8.52% | motif file (matrix) |
svg |
20 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.893e+00 | 0.0185 | 12.0 | 1.57% | 244.7 | 0.53% | motif file (matrix) |
svg |
21 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -6.362e+00 | 0.0299 | 59.0 | 7.70% | 2371.7 | 5.16% | motif file (matrix) |
svg |
22 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.344e+00 | 0.0299 | 33.0 | 4.31% | 1132.0 | 2.46% | motif file (matrix) |
svg |
23 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.256e+00 | 0.0304 | 32.0 | 4.18% | 1093.9 | 2.38% | motif file (matrix) |
svg |
24 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -6.253e+00 | 0.0304 | 67.0 | 8.75% | 2783.4 | 6.06% | motif file (matrix) |
svg |
25 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.224e+00 | 0.0304 | 66.0 | 8.62% | 2736.7 | 5.96% | motif file (matrix) |
svg |
26 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.204e+00 | 0.0304 | 49.0 | 6.40% | 1897.8 | 4.13% | motif file (matrix) |
svg |
27 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.998e+00 | 0.0335 | 52.0 | 6.79% | 2064.8 | 4.49% | motif file (matrix) |
svg |
28 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.762e+00 | 0.0409 | 48.0 | 6.27% | 1892.0 | 4.12% | motif file (matrix) |
svg |
29 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-2 | -5.674e+00 | 0.0431 | 26.0 | 3.39% | 864.8 | 1.88% | motif file (matrix) |
svg |
30 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.654e+00 | 0.0431 | 134.0 | 17.49% | 6413.5 | 13.96% | motif file (matrix) |
svg |
31 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.638e+00 | 0.0431 | 25.0 | 3.26% | 822.5 | 1.79% | motif file (matrix) |
svg |
32 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.550e+00 | 0.0442 | 42.0 | 5.48% | 1621.3 | 3.53% | motif file (matrix) |
svg |
33 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.420e+00 | 0.0488 | 53.0 | 6.92% | 2176.0 | 4.74% | motif file (matrix) |
svg |
34 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.381e+00 | 0.0493 | 56.0 | 7.31% | 2331.7 | 5.07% | motif file (matrix) |
svg |
35 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.359e+00 | 0.0493 | 48.0 | 6.27% | 1934.8 | 4.21% | motif file (matrix) |
svg |
36 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -5.309e+00 | 0.0500 | 33.0 | 4.31% | 1213.3 | 2.64% | motif file (matrix) |
svg |
37 |
| HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer | 1e-2 | -5.181e+00 | 0.0553 | 15.0 | 1.96% | 421.6 | 0.92% | motif file (matrix) |
svg |
38 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -5.159e+00 | 0.0553 | 107.0 | 13.97% | 5037.9 | 10.96% | motif file (matrix) |
svg |
39 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -4.903e+00 | 0.0693 | 50.0 | 6.53% | 2085.4 | 4.54% | motif file (matrix) |
svg |
40 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-2 | -4.795e+00 | 0.0752 | 18.0 | 2.35% | 568.1 | 1.24% | motif file (matrix) |
svg |
41 |
| STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-2 | -4.723e+00 | 0.0789 | 22.0 | 2.87% | 751.0 | 1.63% | motif file (matrix) |
svg |