Information for 3-GTGTTCTGAA (Motif 5)

A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A
Reverse Opposite:
C A G T A C G T T A G C C G T A A C T G C G T A C T G A A G T C G T C A A G T C
p-value:1e-16
log p-value:-3.734e+01
Information Content per bp:1.752
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.35%
Number of Background Sequences with motif479.6
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets56.7 +/- 28.0bp
Average Position of motif in Background47.4 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTGTTCTGAA--
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GTGTTCTGAA--
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTGTTCTGAA-
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTCTGAA----
AGNGTTCTAATGANN
 A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTTCTGAA
GTGCCGTGTGCAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GTGTTCTGAA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGTTCTGAA-
TAATTGTTCTAAAC
 A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTGTTCTGAA----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGTTCTGAA--
GTGGCGTGACNG
 A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGTTCTGAA
CTGTTCCTGG
 A C T G A C G T A C T G G A C T G C A T G T A C C G A T A T C G G T C A G T C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G