Information for 4-BCACAAGGWACANRAG (Motif 4)

A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
Reverse Opposite:
A G T C A G C T A G C T C A G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G C T C T A G T A G C
p-value:1e-16
log p-value:-3.741e+01
Information Content per bp:1.729
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.1 +/- 27.6bp
Average Position of motif in Background56.4 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:BCACAAGGWACANRAG
---CCAGGAACAG---
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:BCACAAGGWACANRAG---
---CGAAGCACACAAAATA
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:BCACAAGGWACANRAG
--ACAAAG--------
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:BCACAAGGWACANRAG
-----TGGAACAGMA-
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:BCACAAGGWACANRAG
-AACAAACAACAAGAG
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---BCACAAGGWACANRAG
TTTGCACACGGCAC-----
 A C G T A C G T A C G T A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:BCACAAGGWACANRAG
------GGAACAAAGR
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:BCACAAGGWACANRAG---
--AAAAAGTAAACAAAGAC
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:BCACAAGGWACANRAG-------
---GAAGTANCACGAATNMRAGT
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:BCACAAGGWACANRAG---
--AAAATGTAAACAAACAG
 A T C G A G T C C T G A T A G C G T C A T G C A C T A G A C T G C G A T C G T A A G T C C G T A G T C A C T G A C T G A T C A G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G