Information for 10-CTTGGTGTTCATG (Motif 17)

A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
Reverse Opposite:
G T A C G C T A G A C T A C T G C T G A C G T A G T A C C G T A A G T C A G T C G T C A C T G A C T A G
p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.812
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets38.6 +/- 15.6bp
Average Position of motif in Background55.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTGGTGTTCATG
CGTGGGTGGTCC--
 A C G T A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTGGTGTTCATG
CCTTTGTTTT----
 A C G T A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTTGGTGTTCATG-
----CTGTTCCTGG
 A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTGGTGTTCATG
TTCGGTGGTCGC-
 A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTGGTGTTCATG--
CTTTGTTTACTTTTN
 A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGTGTTCATG--
NNANTGGTGGTCTTNNN
 A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGTGTTCATG
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTGGTGTTCATG
NTCGGTGGTCGC-
 A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTTGGTGTTCATG----
---GGTTGCCATGGCAA
 A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGTGTTCATG
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A C T G C G A T A G C T A G T C C G T A C G A T A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T