Information for 11-ATTTGTGAAT (Motif 16)

C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T G T A C C G T A A G T C C G T A C G T A C G T A A C G T
p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.964
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.2 +/- 21.8bp
Average Position of motif in Background37.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTGAAT
AAGGTGTKAA-
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTTGTGAAT
AGGTGTTAAT
 C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

HOXA5/MA0158.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGTGAAT
AATTAGTG---
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTGAAT
AAGGTGTGAA-
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTGAAT---
NCNTTTGTTATTTNN
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTTGTGAAT
AGGTGTGAAA
 C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTTGTGAAT
AGGTGTGAAM
 C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGTGAAT------
NTTNTATGAATGTGNNC
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATTTGTGAAT----
---TGTGGATTNNN
 C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTTGTGAAT-------
NTAATTDGCYAATTANNWWD
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A