Information for 9-GGCTAGTACG (Motif 14)

A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G
Reverse Opposite:
G T A C A C T G A C G T C T G A A G T C A C G T C G T A A C T G A G T C A G T C
p-value:1e-7
log p-value:-1.811e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 33.2bp
Average Position of motif in Background41.9 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTACG
AAGGCAAGTGT-
 A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCTAGTACG----
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTACG
TWGTCTGV----
 A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTACG---
NGNTCTAGAACCNGV
 A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTACG-----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCTAGTACG--
TATCATTAGAACGCT
 A C G T A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTAGTACG
NGCTN-----
 A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAGTACG-----
CTACTAGGATGTNNTN
 A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAGTACG-
TGTCTGDCACCT
 A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTACG
AGGCCTAG----
 A C G T A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T C G T A G T A C A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T