Information for 6-TATAAATTGC (Motif 9)

A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C
Reverse Opposite:
A C T G G A T C C G T A G T C A C G A T A C G T A C G T C G T A A C G T T C G A
p-value:1e-13
log p-value:-3.046e+01
Information Content per bp:1.833
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif131.6
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets55.5 +/- 25.2bp
Average Position of motif in Background46.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TATAAATTGC----
TTTATTAATTGCNNGN
 A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T A C G T A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TATAAATTGC----
GTATAAAAGGCGGGG
 A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TATAAATTGC----
GTATAAAAGGCGGGG
 A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TATAAATTGC
GCTATAAATAGC
 A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TATAAATTGC
ACTATAAATAGA
 A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TATAAATTGC
TCTAAAAATAGA
 A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TATAAATTGC----
GAAAAAATTGCAAGG
 A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TATAAATTGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TATAAATTGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATAAATTGC
GCTAAAAATAGC
 A C G T A C G T A G C T T G C A A C G T C G T A C G T A C G T A A C G T C G A T C T A G G T A C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C