Information for 13-CCCTCTAGTG (Motif 22)

A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G
Reverse Opposite:
A G T C G T C A A T G C G C A T C G T A A T C G C T G A A C T G A C T G A C T G
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif60.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.0 +/- 21.1bp
Average Position of motif in Background53.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTAGTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTAGTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTAGTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCTCTAGTG-
--NTCAAGTGG
 A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTAGTG
TTCCCCCTAC--
 A C G T A C G T A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTCTAGTG--
--CTYRAGTGSY
 A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCTCTAGTG--
--BTBRAGTGSN
 A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCTCTAGTG--
--NTCAAGTGGN
 A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTCTAGTG
AGCCACTCAAG--
 A C G T A C G T A C G T A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTAGTG-----
NANTTTCAAGTGGTTAN
 A C G T A C G T A G T C G T A C A G T C A G C T A T G C A C G T C G T A A T C G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T