Information for 12-AAGCCTGGCG (Motif 21)

C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G
Reverse Opposite:
G A T C A C T G A G T C A G T C T C G A A C T G A C T G A G T C A C G T A C G T
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.869
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif73.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.8 +/- 21.6bp
Average Position of motif in Background48.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGCCTGGCG
AGGCCTNG--
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGCCTGGCG
AGGCCTAG--
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGCCTGGCG
AAGCTTG---
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCTGGCG---
CAGGCCNNGGCCNN
 A C G T C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGGCG--
-NGCCTGAGGCN
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGGCG--
-TGCCTGAGGCN
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTGGCG----
ATTGCCTGAGGCAAT
 A C G T C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTGGCG
TAATCCCN---
 A C G T C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGCCTGGCG-------
NAGANTGGCGGGGNGNA
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGGCG--
-NGCCTNAGGCN
 C G T A G T C A A C T G A G T C A G T C A G C T A C T G A C T G T G A C C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T