Information for 10-CCAGAGTAAACTC (Motif 16)

A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C
Reverse Opposite:
A T C G G T C A C T A G A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 22.8bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCAGAGTAAACTC
NCTAAGTAAACA-
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCAGAGTAAACTC--
NCWRWGTAAACANSV
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCAGAGTAAACTC-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAGAGTAAACTC---
-CAAAGTAAACANNNN
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAGAGTAAACTC-
TGCCAAAATAAACANN
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCAGAGTAAACTC
--AAAGTAAACA-
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCAGAGTAAACTC
--AAAGTAAACA-
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAGAGTAAACTC-
--TATGTAAACANG
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCAGAGTAAACTC
----DGTAAACA-
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C
A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAGAGTAAACTC-
---AAGTAAACAAA
 A G T C A G T C C G T A A C T G C G T A A C T G A C G T G T C A C G T A C G T A A G T C A C G T A T G C A C G T
A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A