Information for 2-CAGCGCAGCGCCGAGC (Motif 5)

A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A G T C A C T G A C T G A T G C A T C G A G T C A G C T A T C G A G T C A T C G A G T C A C G T A T C G
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 23.5bp
Average Position of motif in Background51.2 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGCGCAGCGCCGAGC--
----GCCGCGCAGTGCGT
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC-
NNNNTTGGCGCCGANNN
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC-
--NCGCAGCGGGGGGTC
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC
---CGGAGC-------
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGCAGCGCCGAGC
NNNANTGCAGTGCNNTT-
 A C G T A C G T A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC
---CGCAGCTGCG---
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC-
NNNNTTGGCGCCGANNN
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC-
---CACAGCGGGGGGTC
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CAGCGCAGCGCCGAGC
-----CAGCC------
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CAGCGCAGCGCCGAGC
---CACAGN-------
 A T G C C G T A C T A G A T G C A C T G A T G C C T G A A C T G A T G C A T C G A G T C G T A C A C T G T C G A A C T G A T G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T