Information for 1-RTWCTMRGCTGCA (Motif 3)

C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C G T C A A C T G A G T C A G T C A C G T C G T A A C T G C G T A C G T A A G C T
p-value:1e-12
log p-value:-2.989e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.3 +/- 18.6bp
Average Position of motif in Background44.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RTWCTMRGCTGCA
---CGCAGCTGCG
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RTWCTMRGCTGCA
------NGCTN--
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RTWCTMRGCTGCA
-----CAGCTGNT
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RTWCTMRGCTGCA
--NNACAGCTGC-
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RTWCTMRGCTGCA
--NAHCAGCTGD-
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---RTWCTMRGCTGCA
AGTATTCTCGGTTGC-
 A C G T A C G T A C G T C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RTWCTMRGCTGCA----
CTCAGCAGCTGCTACTG
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:RTWCTMRGCTGCA
----TWGTCTGV-
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RTWCTMRGCTGCA-
---GACAGCTGCAG
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:RTWCTMRGCTGCA-
----NCAGCTGCTG
 C T G A A C G T C G A T A G T C C G A T T G C A C T A G A C T G A G T C A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G