Information for 12-MGCAGMTCYC (Motif 24)

T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
Reverse Opposite:
A C T G T C A G A T C G T G C A C A G T A T G C C G A T A T C G G T A C A C T G
p-value:1e-4
log p-value:-1.090e+01
Information Content per bp:1.550
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif1665.1
Percentage of Background Sequences with motif3.60%
Average Position of motif in Targets47.8 +/- 26.0bp
Average Position of motif in Background50.9 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MGCAGMTCYC
----GCTCCG
 T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MGCAGMTCYC
CGCAGCTGCG
 T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--MGCAGMTCYC
NNAGCAGCTGCT
 A C G T A C G T T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MGCAGMTCYC
CNGTCCTCCC
 T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-MGCAGMTCYC
NNGCAGCTGTC
 A C G T T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MGCAGMTCYC
AGCAGCTGCT
 T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:MGCAGMTCYC
TKCTGTTCCA
 T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-MGCAGMTCYC
CAGCAGCTGN-
 A C G T T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----MGCAGMTCYC---
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:MGCAGMTCYC---
TGCAGCTGTCCCT
 T G A C C A T G T A G C G C T A T A C G G T C A A C G T T A G C A G T C G T A C A C G T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T