Information for 13-CTGGACATTCCAC (Motif 23)

A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C T G A C T G A A C G T C T A G A C G T A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.138e+01
Information Content per bp:1.882
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 22.5bp
Average Position of motif in Background26.2 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGGACATTCCAC
--GGAAATTCCC-
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGGACATTCCAC
--GGAAATTCCC-
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTGGACATTCCAC
----ACATTCCA-
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGGACATTCCAC
-GGGGATTTCC--
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGGACATTCCAC
---CACATTCCAT
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGGACATTCCAC
---CACATTCCAT
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGACATTCCAC
--GGAAATCCCC-
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGGACATTCCAC
-GGGAAATCCCCN
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGGACATTCCAC-
----RCATTCCWGG
 A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGGACATTCCAC
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G C G T A A G T C G T C A A G C T A G C T A G T C A G T C G T C A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T