Information for 12-CGAAAGGGCCAGG (Motif 21)

A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G A G T C G T A C A G T C A C G T A C G T A C G T A T G C A C T G
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.2 +/- 9.2bp
Average Position of motif in Background23.8 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGAAAGGGCCAGG
----CGTGCCAAG
 A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGAAAGGGCCAGG
------TGCCAA-
 A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGAAAGGGCCAGG--
TCTCAAAGGTCACGAG
 A C G T A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGAAAGGGCCAGG
GGAGAAAGGTGCGA-
 A C G T A C G T A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGAAAGGGCCAGG
--CAAAGGTCAG-
 A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGAAAGGGCCAGG----
-NNAGGGGCGGGGTNNA
 A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGAAAGGGCCAGG---
----AGGTCAAGGTCA
 A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGAAAGGGCCAGG
CCGGAAGTGGC---
 A C G T A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGAAAGGGCCAGG
-CCAACTGCCA--
 A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGAAAGGGCCAGG
ANGNAAAGGTCA--
 A C G T A G T C A T C G G T C A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T