Information for 9-GAGCCGACAA (Motif 19)

A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A
Reverse Opposite:
A C G T A C G T C A T G C G A T T A G C A C T G A C T G A G T C A G C T A G T C
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.849
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif96.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets45.7 +/- 26.8bp
Average Position of motif in Background51.0 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGCCGACAA
CAGCC-----
 A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCGACAA
CGGAGC------
 A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCCGACAA---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCCGACAA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGCCGACAA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGCCGACAA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GAGCCGACAA
GRTGMTRGAGCC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGCCGACAA----
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCCGACAA---
ARGAGGMCAAAATGW
 A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGCCGACAA---
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C A G T C A T C G G C T A G T A C C G T A T G C A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C