Information for 5-AAACGCAGCC (Motif 12)

C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C G T C T A G G A T C A C T G A G C T A G C T A C G T
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.842
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif140.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets49.9 +/- 20.9bp
Average Position of motif in Background45.2 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAACGCAGCC
AAATCACAGCA
 A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACGCAGCC
AAATCACTGC-
 A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AAACGCAGCC
-----CAGCC
 C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAACGCAGCC
AAACCACAGC-
 A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAACGCAGCC--
----BCAGACWA
 C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAACGCAGCC
AAACCGCAA--
 A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAACGCAGCC
---CACAGN-
 C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAACGCAGCC
NAAACCACAG--
 A C G T A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAACGCAGCC
AAACCACAGAN
 A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAACGCAGCC
AAACCACANN-
 A C G T C G T A C T G A T C G A T G A C C T A G G A T C C G T A C T A G A T G C A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T