Information for 9-GGGTGCGCAGAGCATG (Motif 25)

A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G
Reverse Opposite:
A G T C C T G A A C G T A C T G A G T C A C G T A G T C A C G T A C T G A G T C T A C G A G T C C G T A A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.878
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 26.0bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGGTGCGCAGAGCATG---
----GAGCACAGCAGGACA
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGTGCGCAGAGCATG
-GCCGCGCAGTGCGT-
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGGTGCGCAGAGCATG---
----CCACACAGCAGGAGA
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGGTGCGCAGAGCATG---
----CCACACAGCAGGAGA
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGGTGCGCAGAGCATG
------DCTCAGCAGG
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGGTGCGCAGAGCATG---
-------CACAGCAGGGGG
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGGTGCGCAGAGCATG
-RGKGGGCGGAGC---
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GGGTGCGCAGAGCATG
-------CGGAGC---
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGCGCAGAGCATG
GCGCATGCGCAG------
 A C G T A C G T A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GGGTGCGCAGAGCATG-----
------DCHCAGCAGGRGGCC
 A C T G A C T G C T A G C G A T A C T G A G T C T A C G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C