Information for 5-GACAGGGGCAGTGCCC (Motif 18)

T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C
Reverse Opposite:
C A T G A T C G A C T G A G T C G T C A A G T C A C G T A C T G A G T C T A G C G T A C A T G C A C G T A C T G A G C T A T G C
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.747
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif48.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.6 +/- 16.6bp
Average Position of motif in Background47.4 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GACAGGGGCAGTGCCC--
----AGGTCANTGACCTN
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GACAGGGGCAGTGCCC
-TCAGNGAGCGTGAC-
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GACAGGGGCAGTGCCC--
-NNNANTGCAGTGCNNTT
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GACAGGGGCAGTGCCC-----
----CGAACAGTGCTCACTAT
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GACAGGGGCAGTGCCC------
------GGGTGTGCCCAAAAGG
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GACAGGGGCAGTGCCC
CACAGN----------
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACAGGGGCAGTGCCC--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GACAGGGGCAGTGCCC
---AGAGGAAGTG---
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GACAGGGGCAGTGCCC
---GGGGGCGGGGCC-
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GACAGGGGCAGTGCCC
-CCAGGAACAG-----
 T A C G C T G A A G T C C G T A T A C G A C T G A T C G T C A G A G T C C G T A T C A G A C G T C T A G T G A C A T G C G A T C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T