Information for 3-TAGATGGCGC (Motif 11)

A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C
Reverse Opposite:
A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T T G C A
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.880
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif57.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets46.8 +/- 29.5bp
Average Position of motif in Background51.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAGATGGCGC-
CAAGATGGCGGC
 A C G T A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TAGATGGCGC--
-TAATGGCGGNC
 A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TAGATGGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------TAGATGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAGATGGCGC
AACAGATGGC--
 A C G T A C G T A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAGATGGCGC-
CAAGATGGCGGC
 A C G T A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TAGATGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAGATGGCGC-----
ATAAGGGCGCGCGAT
 A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TAGATGGCGC---
-----GGCGCGCT
 A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGATGGCGC-----
ATAAAGGCGCGCGAT
 A C G T C G T A A C T G C T G A A C G T A C T G A C T G A G T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T