Information for 2-GMCAGTTGGC (Motif 10)

A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
Reverse Opposite:
C T A G A G T C G T A C G T C A T G C A A G T C C G A T A T C G A C T G G T A C
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.721
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif298.5
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets52.6 +/- 26.4bp
Average Position of motif in Background50.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GMCAGTTGGC--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GMCAGTTGGC
TGGCAGTTGG-
 A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GMCAGTTGGC
TGGCAGTTGN-
 A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----GMCAGTTGGC--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GMCAGTTGGC
AACAGATGGC
 A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GMCAGTTGGC
VNAVCAGCTGGC
 A C G T A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GMCAGTTGGC--
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GMCAGTTGGC
NNVCAGCTGB-
 A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GMCAGTTGGC
NNVVCAGCTGBN
 A C G T A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GMCAGTTGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G T G A C A T G C C G T A C T A G A C G T A C G T A C T G T C A G G A T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G