Information for 16-CTTCTTCAAACTC (Motif 33)

A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T C A G T C A A C T G
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 24.4bp
Average Position of motif in Background35.7 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTCTTCAAACTC
CGGTTTCAAA---
 A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTCTTCAAACTC
--NATTCAAAT--
 A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTCTTCAAACTC
--GCTTCC-----
 A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTTCTTCAAACTC--
----TTCAAGGTCAT
 A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTTCTTCAAACTC
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTTCTTCAAACTC
GGTCGTAAAATT-
 A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTTCTTCAAACTC--
CCGTCTTCCCCCTCAC
 A C G T A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CTTCTTCAAACTC
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CTTCTTCAAACTC
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTTCTTCAAACTC
-TTCTTGGAAAN-
 A G T C C A G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A G T C A A G T C A C G T A G T C
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T