Information for 3-RATTTGATGTCCTGGG (Motif 3)

C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
Reverse Opposite:
T A G C G A T C A G T C C G T A C A T G A C T G C G T A G T A C G T C A A G C T A G T C C G T A C G T A G T C A C G A T A G T C
p-value:1e-13
log p-value:-3.223e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 30.1bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN/MA0488.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RATTTGATGTCCTGGG
AAGATGATGTCAT---
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:RATTTGATGTCCTGGG
------ATTTCCTGTN
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

JUND(var.2)/MA0492.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RATTTGATGTCCTGGG
AAAGATGATGTCATC--
 A C G T C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RATTTGATGTCCTGGG
CCTTTGATGT------
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RATTTGATGTCCTGGG
TNCCTTTGATGT------
 A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RATTTGATGTCCTGGG
CCTTTGAWGT------
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RATTTGATGTCCTGGG
------ATTTCCTGTN
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RATTTGATGTCCTGGG
TNCCTTTGATCTTN----
 A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RATTTGATGTCCTGGG
-NGATGACGTCAT---
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
A C G T A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RATTTGATGTCCTGGG
-NGATGACGTCAT---
 C T A G C G T A A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T A G T C G A T C A C G T A C T G C A T G A T C G
A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T