Information for 5-TTTTGTTAGG (Motif 20)

G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G
Reverse Opposite:
G A T C G A T C G A C T T G C A C T G A T A G C C G T A T C G A T C G A C T G A
p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.659
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif8.13%
Number of Background Sequences with motif1520.2
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets48.9 +/- 26.3bp
Average Position of motif in Background49.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TTTTGTTAGG
TTTTATKRGG
 G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTAGG----
NNTTTTGTTTTGATNT
 A C G T A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTTAGG--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTTAGG
NTTTTATTGG-
 A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTAGG---
NCNTTTGTTATTTNN
 A C G T A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTAGG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTTAGG
TTTTTATTGG-
 A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTGTTAGG
TTTTATTRGN
 G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTTAGG--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTTAGG
NTTTTATTGG-
 A C G T G A C T A G C T A G C T G C A T A T C G G A C T A C G T C T G A C T A G C T A G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T