Information for 2-CWAKGACAGAGTTGTG (Motif 2)

G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
Reverse Opposite:
A T G C C G T A A T G C G T C A C G T A A T G C G C A T A G T C A G C T A T C G A C G T A T G C G T A C G C A T G C T A A C T G
p-value:1e-14
log p-value:-3.241e+01
Information Content per bp:1.702
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.1 +/- 16.9bp
Average Position of motif in Background52.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CWAKGACAGAGTTGTG
AACAATGGTAGTGTT---
 A C G T A C G T G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CWAKGACAGAGTTGTG
--ATGCCAGACN----
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CWAKGACAGAGTTGTG
GAACAATTGCAGTGTT---
 A C G T A C G T A C G T G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CWAKGACAGAGTTGTG-
CAAATCCAGACATCACA
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CWAKGACAGAGTTGTG
TTGACCGAGAATTCC-
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CWAKGACAGAGTTGTG-----
-------AAAATTGTTATGAA
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CWAKGACAGAGTTGTG
AGGTGHCAGACA----
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CWAKGACAGAGTTGTG-----
----GGAAAAATTGTTAGGAA
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CWAKGACAGAGTTGTG
--TTGACAGC------
 G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:10
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--CWAKGACAGAGTTGTG
AACAATTTCAGTGTT---
 A C G T A C G T G T A C C G A T C G T A C A T G A T C G G T C A A T G C C T G A A C T G C G T A A T C G G A C T A C G T T A C G C G A T A T C G
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C G T