Information for 3-TCTTAGTTCC (Motif 16)

A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C
Reverse Opposite:
A C T G A T C G G C T A C G T A A G T C C G A T T C G A C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.845
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif78.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets60.8 +/- 29.3bp
Average Position of motif in Background49.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCTTAGTTCC
YCTTTGTTCC
 A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCTTAGTTCC---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCTTAGTTCC---
TACCCTAGTTACCGA
 A C G T A C G T A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCTTAGTTCC---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTTAGTTCC
ASTTTCACTTCC
 A C G T A C G T A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTTAGTTCC
CCWTTGTYYB
 A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTTAGTTCC-
-ACTAGTTAAC
 A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTTAGTTCC
ASTTTCASTTYC
 A C G T A C G T A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTTAGTTCC-----
--TTACTTCCTNGTN
 A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTTAGTTCC------
--NNACTTCCTCTTNN
 A C G T A G T C C G A T A G C T C G T A A C T G C G A T C G A T T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A