Information for 3-CTGAACAGACACA (Motif 10)

A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
Reverse Opposite:
C G A T A T C G A C G T A C T G A C G T G T A C A C G T A C T G A C G T A C G T A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 20.7bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGAACAGACACA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGAACAGACACA--
AGCAACAGCCGCACC
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGAACAGACACA-
----CCAGACRSVB
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGAACAGACACA
----CCAGACAG-
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGAACAGACACA
---AACCGANA--
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGAACAGACACA
----BCAGACWA-
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGAACAGACACA
CGGAAGTGAAAC-
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGAACAGACACA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGAACAGACACA---
CAAATCCAGACATCACA
 A C G T A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGAACAGACACA
-CCAACTGCCA--
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A T G C C G T A
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T