Information for 3-GCGMGCRAAGSKWGGS (Motif 2)

A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
Reverse Opposite:
A T C G A G T C A G T C C G A T G T C A A T G C A G T C A C G T A G C T A G T C A C T G A G T C A C G T A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.463e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 15.8bp
Average Position of motif in Background41.7 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GCGMGCRAAGSKWGGS
ATAAAGGCGCGCGAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCGMGCRAAGSKWGGS
ATAAGGGCGCGCGAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCGMGCRAAGSKWGGS--
--TCGCGAAGGTTGTACT
 A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G A C G T A C G T
A C G T A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCGMGCRAAGSKWGGS
GCCGCGCAGTGCGT---
 A C G T A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCGMGCRAAGSKWGGS
TTCGCGCGAAAA-------
 A C G T A C G T A C G T A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GCGMGCRAAGSKWGGS
TGGCGCGCGCGCCTGA----
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCGMGCRAAGSKWGGS
GGGCGGGAAGG-----
 A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCGMGCRAAGSKWGGS
-------AAGCTTG--
 A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCGMGCRAAGSKWGGS
TGGCGGGAAAHB------
 A C G T A C G T A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCGMGCRAAGSKWGGS
-GGAACAAAGR-----
 A C T G A G T C A C T G G T C A A C T G A G T C T C A G C T G A C G T A A C T G A T C G A C G T C G T A A C T G A C T G T A C G
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T