Information for 6-GGAATAGTGT (Motif 15)

A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A G T C A C G T C G T A C G A T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.952
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.6 +/- 24.3bp
Average Position of motif in Background69.4 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0035.1_Gsc/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GGAATAGTGT--
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGAATAGTGT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGAATAGTGT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAATAGTGT
GGATTAGC--
 A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGAATAGTGT
GNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGAATAGTGT
NNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAATAGTGT
GGGATTANN--
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAATAGTGT
RGGATTAR---
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGAATAGTGT
VRGGATTARN--
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAATAGTGT
TGGAACAGMA-
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T