Information for 7-TCAGYCGGCGCCC (Motif 14)

C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
Reverse Opposite:
T C A G A T C G A C T G G T A C A T C G A T G C A G T C A C T G C T A G A G T C A C G T A C T G G C T A
p-value:1e-6
log p-value:-1.437e+01
Information Content per bp:1.836
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif116.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets48.2 +/- 26.2bp
Average Position of motif in Background52.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCAGYCGGCGCCC
DCHCAGCAGGRGGCC
 A C G T A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL002.1_INR/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAGYCGGCGCCC
TCAGTCTT-----
 C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCAGYCGGCGCCC
DCTCAGCAGG-----
 A C G T A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGYCGGCGCCC----
-TTGGGGGCGCCCCTAG
 C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TCAGYCGGCGCCC-
------GGCGCGCT
 C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCAGYCGGCGCCC
AGCAACAGCCGCACC--
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCAGYCGGCGCCC-----
-CCTTCGGCGCCAAAAGG
 C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCAGYCGGCGCCC-
GTCWGCTGTYYCTCT
 A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCAGYCGGCGCCC
NAHCAGCTGD-----
 A C G T A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCAGYCGGCGCCC
CACAGCAGGGGG--
 A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A T G C A C T G A G T C A T G C A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T