Information for 6-TGGAGCCGGTGGC (Motif 11)

A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C
Reverse Opposite:
A C T G G T A C A G T C T C G A A G T C A G T C A C T G A C T G A G T C A C G T A G T C A G T C G T C A
p-value:1e-6
log p-value:-1.565e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets69.1 +/- 19.6bp
Average Position of motif in Background46.5 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGAGCCGGTGGC---
-ATTGCCTCAGGCAAT
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGGAGCCGGTGGC-
--SDGCAGGTGCNS
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGCCGGTGGC
GRTGMTRGAGCC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGGAGCCGGTGGC-
---NGCCTGAGGCN
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGAGCCGGTGGC
CGGAGC-------
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGAGCCGGTGGC-
---TGCCTGAGGCN
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGAGCCGGTGGC-
---AGCCTCAGGCA
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGAGCCGGTGGC---
-ATTGCCTGAGGCAAT
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGAGCCGGTGGC--
-GGCGGGGGCGGGGG
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C A C G T A C G T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGCCGGTGGC
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G C T A C T G A C T G G T A C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T