Information for 4-TTCTSCTTGCCTGTGG (Motif 7)

A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G
Reverse Opposite:
A G T C G T A C C T G A G T A C C G T A A C T G A C T G A G T C C T G A C G T A A C T G A T G C G C T A A C T G C T G A C T G A
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 19.5bp
Average Position of motif in Background61.0 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG
--NNACTTGCCTT---
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG--
-------TGCCTGAGGCN
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG
--NNACTTACCTN---
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG--
-------NGCCTGAGGCN
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG----
-----NTNGCCTCAGGCNNN
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCTSCTTGCCTGTGG
GTCATGCHTGRCTGS--
 A C G T A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG--
-------NGCCTNAGGCN
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTCTSCTTGCCTGTGG----
-----ANTGCCTGAGGCAAN
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TTCTSCTTGCCTGTGG
----CCTCACCTG---
 A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCTSCTTGCCTGTGG
NGTCACGCTTGGCTGC--
 A C G T A C G T A G C T A G C T G T A C C A G T T A C G A G T C C G A T A G C T T C A G A G T C A G T C C G A T A C T G A G C T A C T G C T A G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T