Information for 3-AAGATGGCGG (Motif 6)

T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G
Reverse Opposite:
A T G C T A G C C A T G A G T C A G T C C G T A C G A T A T G C A G C T A G C T
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.725
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif1031.9
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets52.8 +/- 25.5bp
Average Position of motif in Background50.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGG-
CAAGATGGCGGC
 A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGG-
CAAGATGGCGGC
 A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAGATGGCGG--
-TAATGGCGGNC
 T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAGATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGG
AACAGATGGC--
 A C G T A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAGATGGCGG----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGATGGCGG---
-RGKGGGCGGAGC
 T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T A C G T A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGG---
GGGNGGGGGCGGGGC
 A C G T A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGG
AACAGATGGT--
 A C G T A C G T T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGATGGCGG----
--BTKGGCGGGAAA
 T C G A C T G A T A C G G C T A G C A T C T A G A C T G G T A C A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A