Information for 4-TGCCCTCTGCDGG (Motif 5)

G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G
Reverse Opposite:
A T G C A G T C G T C A A C T G A G T C C T G A A C T G C G T A A C T G A C T G A C T G G T A C C T G A
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 20.7bp
Average Position of motif in Background54.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.79
Offset:-6
Orientation:forward strand
Alignment:------TGCCCTCTGCDGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCTCTGCDGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGCCCTCTGCDGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCCCTCTGCDGG-----
---DCHCAGCAGGRGGCC
 G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCCCTCTGCDGG
---DCTCAGCAGG
 G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGCCCTCTGCDGG---
----CACAGCAGGGGG
 G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCCCTCTGCDGG--
GACCCCCCGCTGTGC
 G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCCCTCTGCDGG--
GACCCCCCGCTGCGC
 G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCCCTCTGCDGG-
GACCCCCCGCTGTG
 G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTGCDGG
CTGACCTTTG----
 A C G T G A C T A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A G T C C A G T A C T G A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T