Information for 8-CTTGGYTKGH (Motif 34)

G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
Reverse Opposite:
C T G A T A G C G T C A C T G A T C G A T A G C G A T C T G C A C G T A C T A G
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.522
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif7.95%
Number of Background Sequences with motif1715.3
Percentage of Background Sequences with motif3.61%
Average Position of motif in Targets45.7 +/- 27.6bp
Average Position of motif in Background50.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTGGYTKGH
YCTTTGTTCC-
 A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTGGYTKGH
CCWTTGTYYB-
 A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTGGYTKGH
CCTTTGTT---
 A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGYTKGH
NNACTTGCCTT--
 A C G T A C G T A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGYTKGH--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTGGYTKGH--
CGTGGGTGGTCC
 G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGYTKGH--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTGGYTKGH--
TACCCTAGTTACCGA
 A C G T A C G T A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTGGYTKGH
WDNCTGGGCA---
 A C G T A C G T A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTGGYTKGH
CCATTGTTYB-
 A C G T G A T C G C A T A C G T C T A G A T C G A G C T G A C T C A G T A T C G G A C T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T