Information for 19-AMGCACGCACTTT (Motif 31)

T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A T A C G A G C T C A T G G T A C T C A G C G A T A C T G A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.706
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif55.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets40.5 +/- 25.4bp
Average Position of motif in Background50.9 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AMGCACGCACTTT
TBGCACGCAA---
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AMGCACGCACTTT-
AGCGGCACACACGCAA
 A C G T A C G T T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AMGCACGCACTTT
---CACGCA----
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AMGCACGCACTTT-
TGGCGCGCGCGCCTGA
 A C G T A C G T T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AMGCACGCACTTT----
--CCTTGCAATTTTTNN
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AMGCACGCACTTT
--GCACGTAY---
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AMGCACGCACTTT
--GCACGTNC---
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AMGCACGCACTTT-
ANCGCGCGCCCTTNN
 A C G T T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AMGCACGCACTTT-
------GCACTTAA
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AMGCACGCACTTT
--GCACGTACCC-
 T C G A T G C A A C T G A G T C C G T A A G T C A C T G G A T C C T G A A T G C A C G T A G C T A G C T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T